Groupe de Physique Statistique

Equipe 106, Institut Jean Lamour

par Orateurs
Grp Travail
Theses, Postes

Séminaire de groupe

Theoretical aspects of biological fitness landscapes
Joachim Krug
Theoretische Physik, Universite de Cologne (Allemagne)
jeudi 25 janvier 2018 , 10h25
Salle de séminaire du groupe de Physique Statistique

Biological evolution can be conceptualized as a search process in the space of gene sequences guided by the fitness landscape, a mapping that assigns a measure of reproductive value to each genotype. The relationship between genotype and fitness is generally complex, as it is mediated by the multidimensional organismic phenotype that interacts with the environment and thereby determines reproductive success. Two modeling strategies have been devised to deal with this situation. One is to shortcut the intermediate phenotypic level by assigning fitness directly to genotypes. This leads to probabilistic models that define ensembles of random functions on Hamming spaces or (in the standard case of binary sequences) on the hypercube. An alternative and biologically more realistic approach is provided by Fisher's geometric model (FGM), which describes the phenotype as a vector in an n-dimensional Euclidean trait space with a unique fitness optimum. Genetic mutations are encoded as random phenotypic displacements, and complexity arises from the difficulty of optimizing a smooth function by a finite number of random vectors. After a historical introduction and an overview of the current understanding of real fitness landscapes that is available from empirical studies, I will survey quantitative measures of fitness landscape complexity and present the results of a recent analytical study of the fitness landscape generated by FGM.

Fichier PDF

Haut de page